Re: [Nolug] Genome Sequencing uses: Perl

From: Ron Johnson <ron.l.johnson_at_cox.net>
Date: Fri, 26 Sep 2003 10:53:49 -0500
Message-Id: <1064591629.26427.150.camel@haggis>

On Fri, 2003-09-26 at 10:45, Mark A. Hershberger wrote:
> Since someone on this list asked how much Perl was actually used in
> bioinformatics, I thought I'd share this. I'm in a discussion with
> someone at the Genome Sequencing Lab at WUSTL and he told me the
> following:
>
> Yes, Perl is the language of choice. Other languages (C, Java)
> are used very infrequently and their use are driven either by the
> needs of the program (C) or the knowledge of the developer (Java).
> Shell scripting is also used for small stuff.

I'm sure it's because regex's are so efficient in Perl....

-- 
-----------------------------------------------------------------
Ron Johnson, Jr. ron.l.johnson@cox.net
Jefferson, LA USA
After listening to many White House, Pentagon & CENTCOM 
briefings in both Gulf Wars, it is my firm belief that most 
"senior correspondents" either have serious agendas that don't 
get shaken by facts, or are dumb as dog feces.
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Received on 09/26/03

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